The Number of K-Mer Matches Between Two DNA Sequences as a Function of K and Applications to Estimate Phylogenetic Distances

PLoS ONE - United States
doi 10.1371/journal.pone.0228070
Full Text
Abstract

Available in full text

Date
Authors
Publisher

Public Library of Science (PLoS)

Related search

Distributional Regimes for the Number of K-Word Matches Between Two Random Sequences

Proceedings of the National Academy of Sciences of the United States of America
Multidisciplinary
2002English

The Slater and Sub-K-Domination Number of a Graph With Applications to Domination and K-Domination

Discussiones Mathematicae - Graph Theory
CombinatoricsApplied MathematicsDiscrete Mathematics
2020English

Separating Significant Matches From Spurious Matches in DNA Sequences

Journal of Computational Biology
GeneticsMolecular BiologyComputational TheorySimulationComputational MathematicsMathematicsModeling
2012English

Erratum To: The ( K , S ) $(K,s)$ -Fractional Calculus of K-Mittag-Leffler Function

Advances in Difference Equations
Applied MathematicsNumber TheoryAnalysisAlgebra
2017English

Identification and Function of a Cytoplasmic K+Site of the Na+, K+-ATPase

Journal of Biological Chemistry
BiochemistryCell BiologyMolecular Biology
2008English

Figure S2: Plot of DIC Against the Number of K Clusters, and Tess Plots for K = 2 to K = 6

English

A Method for Determining the Mod-$2^k$ Behaviour of Recursive Sequences, With Applications to Subgroup Counting

Electronic Journal of Combinatorics
CombinatoricsApplied MathematicsMathematicsGeometryDiscrete MathematicsComputational TheoryTopologyTheoretical Computer Science
2012English

Hierarchical Clustering of DNA K-Mer Counts in RNAseq Fastq Files Identifies Sample Heterogeneities

International Journal of Molecular Sciences
Organic ChemistryMolecular BiologyTheoretical ChemistryInorganic ChemistryComputer Science ApplicationsSpectroscopyMedicineCatalysisPhysical
2018English

Sequences of K-Reflexivity Defects

Operators and Matrices
Number TheoryAnalysisAlgebra
2016English

Amanote Research

Note-taking for researchers

Follow Amanote

© 2024 Amaplex Software S.P.R.L. All rights reserved.

Privacy PolicyRefund Policy