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Figure 3: Maximum Likelihood Phylogram From Analysis of Complete Plastomes Excluding Gapped Sites and Including Positively Selected Sites (Tree X) Showing Relationships Among Major Lineages of Poaceae.
doi 10.7717/peerj.4299/fig-3
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Supplemental Information 14: Alignment of Complete Plastomes, Including Gapped Sites and Positively Selected Sites, for 250 Grass Accessions (Dataset W); PHYLIP Format.
Supplemental Information 10: Alignment of Plastome Coding Regions, Including Gapped Sites and Excluding Positively Selected Sites, for 250 Grass Accessions (Dataset G); PHYLIP Format.
Supplemental Information 7: Alignment of rbcL, ndhF, matK, and trnK Intron Excluding Gapped Sites and Positively Selected Sites, for 250 Grass Accessions (Dataset D); PHYLIP Format.
Figure 3: Rhodopsin (Rho) Maximum Likelihood Tree.
Supplemental Information 4: Alignment of rbcL, ndhF, matK, and trnK Intron Sequences, Including Gapped Sites and Positively Selected Sites, for 250 Grass Accessions (Dataset A); PHYLIP Format.
Figure 2: Maximum Likelihood Phylogenetic Tree.
Figure 3: Time-Tree of Cryptic Lineages Among Chromis Viridis Obtained From BEAST.
Figure 5: Complete Plastid Genome Phylogenetic Tree of 49 Species Based on Maximum Likelihood Analysis and Bayesian Inference.
Figure 2: Maximum Likelihood Hypothesis for Relationships Among Selected Taxa of Bibionomorpha Based on Dataset Without 3rd Codon Positions.
