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Publications by Alexander L. Perryman
Virtual Screening With AutoDock Vina and the Common Pharmacophore Engine of a Low Diversity Library of Fragments and Hits Against the Three Allosteric Sites of HIV Integrase: Participation in the SAMPL4 Protein–ligand Binding Challenge
Journal of Computer-Aided Molecular Design
Theoretical Chemistry
Drug Discovery
Computer Science Applications
Physical
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Computational Protein–ligand Docking and Virtual Drug Screening With the AutoDock Suite
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Biochemistry
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Parameter Optimization and Virtual Screening Indonesian Herbal Database as Human Immunodeficiency Virus -1 Integrase Inhibitor Using Autodock and Vina
International Journal of Applied Pharmaceutics
Pharmaceutical Science
VSDK: Virtual Screening of Small Molecules Using AutoDock Vina on Windows Platform
Bioinformation
Vinardo: A Scoring Function Based on Autodock Vina Improves Scoring, Docking, and Virtual Screening
PLoS ONE
Multidisciplinary
Structural Studies of the HIV-1 Integrase Protein: Compound Screening and Characterization of a DNA-Binding Inhibitor
PLoS ONE
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Virtual Screening Against Mycobacterium tuberculosisLipoate Protein Ligase B (MtbLipB)and in SilicoADMETEvaluation of Top Hits
Oriental Journal of Chemistry
Biochemistry
Environmental Chemistry
Drug Discovery
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Docking Rigid Macrocycles Using Convex-Pl, AutoDock Vina, and RDKit in the D3R Grand Challenge 4
Journal of Computer-Aided Molecular Design
Theoretical Chemistry
Drug Discovery
Computer Science Applications
Physical
Virtual Ligand Screening Against Comparative Protein Structure Models
Methods in Molecular Biology
Genetics
Molecular Biology
Identification of Binding Sites and Favorable Ligand Binding Moieties by Virtual Screening and Self-Organizing Map Analysis
BMC Bioinformatics
Biochemistry
Applied Mathematics
Computer Science Applications
Structural Biology
Molecular Biology
