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Publications by Andreas Gnirke

ALLPATHS 2: Small Genomes Assembled Accurately and With High Continuity From Short Paired Reads

Genome Biology
2009English

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HI: Haplotype Improver Using Paired-End Short Reads

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A Distributed Framework for Aligning Short Reads to Genomes

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Bin3C: Exploiting Hi-C Sequencing Data to Accurately Resolve Metagenome-Assembled Genomes

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De Novo Fragment Assembly With Short Mate-Paired Reads: Does the Read Length Matter?

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GAPPadder: A Sensitive Approach for Closing Gaps on Draft Genomes With Short Sequence Reads

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Using Paired-End Sequences to Optimise Parameters for Alignment of Sequence Reads Against Related Genomes

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FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads

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Localized Suffix Array and Its Application to Genome Mapping Problems for Paired-End Short Reads

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Reconstructing Cancer Genomes From Paired-End Sequencing Data

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