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Publications by Ankit Malhotra

Ploidy-Seq: Inferring Mutational Chronology by Sequencing Polyploid Tumor Subpopulations

Genome Medicine

Molecular Medicine

Molecular Biology

English

Computational Inference of a Genomic Pluripotency Signature in Human and Mouse Stem Cells

Molecular Biology

Applied Mathematics

Biological Sciences

English

Related publications

Identification of Distinct Tumor Subpopulations in Lung Adenocarcinoma via Single-Cell RNA-seq

Multidisciplinary

English

Tumor Mutational Burden From Tumor-Only Sequencing Compared With Germline Subtraction From Paired Tumor and Normal Specimens

JAMA network open

English

Tumor Mutational Burden Determined by Panel Sequencing Predicts Survival After Immunotherapy in Patients With Advanced Gastric Cancer

Frontiers in Oncology

Cancer Research

English

Sorting Duplicated Loci Disentangles Complexities of Polyploid Genomes Masked by Genotyping by Sequencing

Molecular Ecology

English

SiFit: Inferring Tumor Trees From Single-Cell Sequencing Data Under Finite-Sites Models

English

Association Between Preanalytical Factors and Tumor Mutational Burden Estimated by Next‐Generation Sequencing‐Based Multiplex Gene Panel Assay

Cancer Research

English

PoolHap: Inferring Haplotype Frequencies From Pooled Samples by Next Generation Sequencing

Multidisciplinary

English

A Permutation Approach for Inferring Species Networks From Gene Trees in Polyploid Complexes by Minimising Deep Coalescences

Methods in Ecology and Evolution

Ecological Modeling

English

High-Sensitivity HLA Typing by Saturated Tiling Capture Sequencing (STC-Seq)

English