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Publications by Brandon Friedman

RotoStep: A Chromosome Dynamics Simulator Reveals Mechanisms of Loop Extrusion

Cold Spring Harbor Symposia on Quantitative Biology

Molecular Biology

English

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Emerging Evidence of Chromosome Folding by Loop Extrusion

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Chromosome Organization by Loop Extrusion and Phase Separation

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Tracking of Chromosome and Replisome Dynamics in Myxococcus Xanthus Reveals a Novel Chromosome Arrangement

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RNAP as a Moving Barrier to Loop Extrusion

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Comparative Molecular Dynamics Dynamics of the BRAF Activation Loop Reveals a Biophysical Mechanism of Cancer Recurrence Under Drug Inhibition

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Dynamics of miRNA Driven Feed-Forward Loop Depends Upon miRNA Action Mechanisms

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Direct Imaging of DNA in Living Cells Reveals the Dynamics of Chromosome Formation

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Fire Dynamics Simulator (Version 2) :

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Closed-Loop Stabilization of the Jamming Avoidance Response Reveals Its Locally Unstable and Globally Nonlinear Dynamics

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