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Publications by Carl Kingsford

Coral: An Integrated Suite of Visualizations for Comparing Clusterings

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2012English

Alignment and Clustering of Phylogenetic Markers - Implications for Microbial Diversity Studies

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2010English

Diffusion Archeology for Diffusion Progression History Reconstruction

Knowledge and Information Systems
Information SystemsHuman-Computer InteractionHardwareArchitectureArtificial IntelligenceSoftware
2015English

Semi-Nonparametric Modeling of Topological Domain Formation From Epigenetic Data

Algorithms for Molecular Biology
Computational TheoryApplied MathematicsStructural BiologyMolecular BiologyMathematics
2019English

Metric Labeling and Semi-Metric Embedding for Protein Annotation Prediction

Lecture Notes in Computer Science
Computer ScienceTheoretical Computer Science
2011English

Improving Bloom Filter Performance on Sequence Data Using $$K$$ -Mer Bloom Filters

Lecture Notes in Computer Science
Computer ScienceTheoretical Computer Science
2016English

Kourami: Graph-Guided Assembly for Novel Human Leukocyte Antigen Allele Discovery

Genome Biology
2018English

Quantifying the Benefit Offered by Transcript Assembly With Scallop-Lr on Single-Molecule Long Reads

Genome Biology
2019English

Rapid, Separable Compression Enables Fast Analyses of Sequence Alignments

2015English

HARVESTMAN: A Framework for Hierarchical Feature Learning and Selection From Whole Genome Sequencing Data

2020English

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