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Publications by Denis Torre

BioJupies: Automated Generation of Interactive Notebooks for RNA-Seq Data Analysis in the Cloud

Forensic Medicine

English

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RSEQREP: RNA-Seq Reports, an Open-Source Cloud-Enabled Framework for Reproducible RNA-Seq Data Processing, Analysis, and Result Reporting

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A Comparison of Methods for Differential Expression Analysis of RNA-seq Data

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Erratum To: A Survey of Best Practices for RNA-seq Data Analysis

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An Optimized Protocol for Generation and Analysis of Ion Proton Sequencing Reads for RNA-Seq

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Network-Based Isoform Quantification With RNA-Seq Data for Cancer Transcriptome Analysis

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SeqAcademy: An Educational Pipeline for RNA-Seq and ChIP-Seq Analysis

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Cloud Accelerated Alignment and Assembly of Full-Length Single-Cell RNA-seq Data Using Falco

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Comprehensive Analysis of RNA-seq Data Reveals the Complexity of the Transcriptome in Brassica Rapa

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SEQing: Web-Based Visualization of Arabidopsis Thaliana iCLIP and RNA-seq Data in an Interactive Python Framework

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