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Publications by J Ambia-Garrido
Free Energy Considerations for Nucleic Acids With Dangling Ends Near a Surface: A Coarse Grained Approach
Journal of Physics Condensed Matter
Materials Science
Condensed Matter Physics
Related publications
Capturing RNA Folding Free Energy With Coarse-Grained Molecular Dynamics Simulations
Scientific Reports
Multidisciplinary
Coarse-Grained Modeling of Nucleic Acids Using Anisotropic GayBerne and Electric Multipole Potentials
Developing a Coarse-Grained Model for Bacterial Cell Walls and Evaluating Mechanical Properties and Free Energy Barriers
Coarse-Grained Free-Energy Simulations of Conformational State Transitions in an ABC Exporter
Chinese Journal of Chemical Physics
Theoretical Chemistry
Physical
A Coarse-Grained Reconfigurable Architecture With Compilation for High Performance
International Journal of Reconfigurable Computing
Hardware
Architecture
DNA Duplex Formation With a Coarse-Grained Model
Journal of Chemical Theory and Computation
Theoretical Chemistry
Computer Science Applications
Physical
Conformationally-Dependent Surface Hopping for Reproducing Structural Cross-Correlations With Coarse-Grained Models
Biophysical Journal
Biophysics
Molecular Dynamics Trajectory Compression With a Coarse-Grained Model
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Biotechnology
Applied Mathematics
Genetics
Fast Calculation of ProteinProtein Binding Free Energies Using Umbrella Sampling With a Coarse-Grained Model
