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Publications by John J. Tyson

Model-Driven Experimental Approach Reveals the Complex Regulatory Distribution of P53 by the Circadian Factor Period 2

Proceedings of the National Academy of Sciences of the United States of America
Multidisciplinary
2016English

Functional Motifs in Biochemical Reaction Networks

Annual Review of Physical Chemistry
Theoretical ChemistryPhysical
2010English

Ectopic Activation of the Spindle Assembly Checkpoint Signaling Cascade Reveals Its Biochemical Design

Current Biology
GeneticsMolecular BiologyBiochemistryBiological SciencesNeuroscienceAgricultural
2019English

Models in Biology: Lessons From Modeling Regulation of the Eukaryotic Cell Cycle

BMC Biology
Developmental BiologyEvolutionEcologyGeneticsCell BiologyMolecular BiologyBiochemistryBiological SciencesSystematicsStructural BiologyPlant ScienceBehaviorBiotechnologyAgriculturalPhysiology
2015English

A Mathematical Model for the Reciprocal Differentiation of T Helper 17 Cells and Induced Regulatory T Cells

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2011English

Molecular Mechanisms Creating Bistable Switches at Cell Cycle Transitions

Open Biology
BiochemistryImmunologyGeneticsMolecular BiologyNeuroscience
2013English

Deciphering the Dynamics of Interlocked Feedback Loops in a Model of the Mammalian Circadian Clock

Biophysical Journal
Biophysics
2018English

A Stochastic Model of Size Control in the Budding Yeast Cell Cycle

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2019English

JigCell Run Manager (JC-RM): A Tool for Managing Large Sets of Biochemical Model Parametrizations

BMC Systems Biology
Molecular BiologyApplied MathematicsStructural BiologySimulationComputer Science ApplicationsModeling
2015English

Predicting Network Modules of Cell Cycle Regulators Using Relative Protein Abundance Statistics

BMC Systems Biology
Molecular BiologyApplied MathematicsStructural BiologySimulationComputer Science ApplicationsModeling
2017English

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