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Publications by Lucio H. Castilla
ATACseqQC: A Bioconductor Package for Post-Alignment Quality Assessment of ATAC-seq Data
BMC Genomics
Biotechnology
Genetics
Role of CBFB in Hematopoiesis and Perturbations Resulting From Expression of the Leukemogenic Fusion Gene CBFB-Myh11
Blood
Biochemistry
Immunology
Cell Biology
Hematology
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GSEPD: A Bioconductor Package for RNA-seq Gene Set Enrichment and Projection Display
BMC Bioinformatics
Biochemistry
Applied Mathematics
Computer Science Applications
Structural Biology
Molecular Biology
seqCAT: A Bioconductor R-Package for Variant Analysis of High Throughput Sequencing Data
F1000Research
Genetics
Molecular Biology
Pharmacology
Biochemistry
Microbiology
Immunology
Medicine
Toxicology
Pharmaceutics
A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor
Bioinformatics and Biology Insights
Biochemistry
Computational Mathematics
Applied Mathematics
Computer Science Applications
Molecular Biology
Design of the TRONCO BioConductor Package for TRanslational ONCOlogy
GSAR: Bioconductor Package for Gene Set Analysis in R
BMC Bioinformatics
Biochemistry
Applied Mathematics
Computer Science Applications
Structural Biology
Molecular Biology
Figure 3: ATAC-seq Data Pre-Processing Workflow, File Types and Integrated Tools.
Identification of Transcription Factor Binding Sites Using ATAC-seq
Genome Biology
Fine-Mapping Cellular QTLs With RASQUAL and ATAC-seq
Nature Genetics
Genetics
Ringo – An R/Bioconductor Package for Analyzing ChIP-chip Readouts
BMC Bioinformatics
Biochemistry
Applied Mathematics
Computer Science Applications
Structural Biology
Molecular Biology
