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Publications by Ludovic Cottret

Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth

mSystems
EvolutionEcologyGeneticsMolecular BiologyBiochemistrySystematicsMicrobiologySimulationComputer Science ApplicationsBehaviorModelingPhysiology
2020English

Use of Reconstituted Metabolic Networks to Assist in Metabolomic Data Visualization and Mining

Metabolomics
BiochemistryEndocrinologyClinical BiochemistryMetabolismDiabetes
2010English

Related publications

Erroneous Energy-Generating Cycles in Published Genome Scale Metabolic Networks: Identification and Removal

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2017English

Mechanistic Insights Into Bacterial Metabolic Reprogramming From Omics-Integrated Genome-Scale Models

npj Systems Biology and Applications
GeneticsMolecular BiologyBiochemistryApplied MathematicsSimulationComputer Science ApplicationsModelingDrug Discovery
2020English

Deciphering the Metabolic Capabilities of Bifidobacteria Using Genome-Scale Metabolic Models

Scientific Reports
Multidisciplinary
2019English

Author Correction: Mechanistic Insights Into Bacterial Metabolic Reprogramming From Omics-Integrated Genome-Scale Models

npj Systems Biology and Applications
GeneticsMolecular BiologyBiochemistryApplied MathematicsSimulationComputer Science ApplicationsModelingDrug Discovery
2020English

Genome-Scale Metabolic Representation of Amycolatopsis Balhimycina

Biotechnology and Bioengineering
Applied MicrobiologyBiotechnologyBioengineering
2012English

Functional Classification of Genome-Scale Metabolic Networks

Eurasip Journal on Bioinformatics and Systems Biology
StatisticsGeneticsProbabilityMolecular BiologyBiochemistryMultidisciplinarySignal ProcessingComputer Science ApplicationsComputer ScienceMedicineComputational Mathematics
2009English

Genome-Wide Analysis of Bacterial Determinants of Plant Growth Promotion and Induced Systemic Resistance by Pseudomonas Fluorescens

Environmental Microbiology
EvolutionEcologySystematicsMicrobiologyBehavior
2017English

Revealing the Metabolic Characteristics of Human Embryonic Stem Cells by Genome-Scale Metabolic Modeling

FEBS Letters
GeneticsCell BiologyMolecular BiologyBiochemistryStructural BiologyBiophysics
2018English

iRsp1095: A Genome-Scale Reconstruction of the Rhodobacter Sphaeroides Metabolic Network

BMC Systems Biology
Molecular BiologyApplied MathematicsStructural BiologySimulationComputer Science ApplicationsModeling
2011English

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