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Publications by Mahfuza Sharmin

Heterogeneity of Transcription Factor Binding Specificity Models Within and Across Cell Lines

Genome Research

English

Related publications

Positional Specificity of Different Transcription Factor Classes Within Enhancers

Proceedings of the National Academy of Sciences of the United States of America

Multidisciplinary

English

Deep Learning Models Explore the Structural Effects of Transcription Factor-Dna Complexes on Binding Specificity

Biophysical Journal

English

Predicting Transcription Factor Binding Using Ensemble Random Forest Models

Molecular Biology

English

Ann-Spec: A Method for Discovering Transcription Factor Binding Sites With Improved Specificity

English

The Basis for Evolution of DNA-Binding Specificity of the Aft1 Transcription Factor in Yeasts

English

Decoding the Inversion Symmetry Underlying Transcription Factor DNA-Binding Specificity and Functionality in the Genome

Multidisciplinary

English

MARZ: An Algorithm to Combinatorially Analyze Gapped N-Mer Models of Transcription Factor Binding

BMC Bioinformatics

Applied Mathematics

Computer Science Applications

Structural Biology

Molecular Biology

English

Determinants of DNA-binding Specificity of ETS-domain Transcription Factors.

Molecular and Cellular Biology

Molecular Biology

English

High Resolution Models of Transcription Factor-Dna Affinities Improve in Vitro and in Vivo Binding Predictions

PLoS Computational Biology

Molecular Neuroscience

Molecular Biology

Computational Theory

English