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Publications by Pavan P. Vaidyanathan
Blind Predictions of RNA/Protein Relative Binding Affinities
Biophysical Journal
Biophysics
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Large Scale Relative Protein Ligand Binding Affinities Using Non-Equilibrium Alchemy
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Ligand-Induced Conformational Changes: Improved Predictions of Ligand Binding Conformations and Affinities
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Effects of Water Placement on Predictions of Binding Affinities for P38α MAP Kinase Inhibitors
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Large Scale Free Energy Calculations for Blind Predictions of Protein–ligand Binding: The D3R Grand Challenge 2015
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Fe2+ Binds Iron Responsive Element-Rna, Selectively Changing Protein-Binding Affinities and Regulating mRNA Repression and Activation
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High Resolution Models of Transcription Factor-Dna Affinities Improve in Vitro and in Vivo Binding Predictions
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Comparison of the Binding Affinities of Acyl-CoA-Binding Protein and Fatty-Acid-Binding Protein for Long-Chain Acyl-CoA Esters
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RNA-Binding Affinities and Crystal Structure of Oligonucleotides Containing Five-Atom Amide-Based Backbone Structures