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Publications by Ronald M. Levy

Conformational Analysis of the DFG-Out Kinase Motif and Biochemical Profiling of Structurally Validated Type II Inhibitors

Journal of Medicinal Chemistry
Drug DiscoveryMolecular Medicine
2014English

Coevolutionary Landscapes of Kinase Family Proteins

Biophysical Journal
Biophysics
2019English

Protein Kinase Free Energy Landscapes: The Role of the Activation Loop

Biophysical Journal
Biophysics
2019English

The UWHAM and SWHAM Software Package

Scientific Reports
Multidisciplinary
2019English

Locally Weighted Histogram Analysis and Stochastic Solution for Large-Scale Multi-State Free Energy Estimation

Journal of Chemical Physics
MedicineTheoretical ChemistryAstronomyPhysicsPhysical
2016English

Simulating Replica Exchange: Markov State Models, Proposal Schemes, and the Infinite Swapping Limit

Journal of Physical Chemistry B
SurfacesTheoretical ChemistryMaterials ChemistryFilmsMedicineCoatingsPhysical
2016English

Large Scale Free Energy Calculations for Blind Predictions of Protein–ligand Binding: The D3R Grand Challenge 2015

Journal of Computer-Aided Molecular Design
Theoretical ChemistryDrug DiscoveryComputer Science ApplicationsPhysical
2016English

COMPUTER SIMULATIONS WITH EXPLICIT SOLVENT: Recent Progress in the Thermodynamic Decomposition of Free Energies and in Modeling Electrostatic Effects

Annual Review of Physical Chemistry
Theoretical ChemistryPhysical
1998English

Molecular Dynamics Studies of NMR Relaxation in Proteins

Biophysical Journal
Biophysics
1980English

Integrated Modeling Program, Applied Chemical Theory (IMPACT)

Journal of Computational Chemistry
Computational MathematicsChemistry
2005English

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