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Publications by Shannan Ho Sui

bcbioRNASeq: R Package for Bcbio RNA-seq Analysis

F1000Research
GeneticsMolecular BiologyPharmacologyBiochemistryMicrobiology ImmunologyMedicineToxicologyPharmaceutics
2017English

Visualization of the Small RNA Transcriptome Using seqclusterViz

F1000Research
GeneticsMolecular BiologyPharmacologyBiochemistryMicrobiology ImmunologyMedicineToxicologyPharmaceutics
2019English

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consensusDE: An R Package for Assessing Consensus of Multiple RNA-seq Algorithms With RUV Correction

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spliceR: An R Package for Classification of Alternative Splicing and Prediction of Coding Potential From RNA-seq Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2014English

SeqAcademy: An Educational Pipeline for RNA-Seq and ChIP-Seq Analysis

F1000Research
GeneticsMolecular BiologyPharmacologyBiochemistryMicrobiology ImmunologyMedicineToxicologyPharmaceutics
2018English

GSEPD: A Bioconductor Package for RNA-seq Gene Set Enrichment and Projection Display

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A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor

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TIN: An R Package for Transcriptome Instability Analysis

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2015English

Giardia Lamblia Transcriptome Analysis Using TSS-Seq and RNA-Seq

PLoS ONE
Multidisciplinary
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Apc: An R Package for Age-Period-Cohort Analysis

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2015English

segRDA: An R Package for Performing Piecewise Redundancy Analysis

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Ecological ModelingEcologySystematicsEvolutionBehavior
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