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Publications by Tade Souaiaia

Effect of RNA Integrity on Uniquely Mapped Reads in RNA-Seq

BMC Research Notes
BiochemistryMedicineGeneticsMolecular Biology
2014English

ComB: SNP Calling and Mapping Analysis for Color and Nucleotide Space Platforms

Journal of Computational Biology
GeneticsMolecular BiologyComputational TheorySimulationComputational MathematicsMathematicsModeling
2011English

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HLA Typing From RNA-Seq Sequence Reads

Genome Medicine
Molecular MedicineGeneticsMolecular Biology
2012English

From RNA-seq Reads to Differential Expression Results

Genome Biology
2010English

Trimming of Sequence Reads Alters RNA-Seq Gene Expression Estimates

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2016English

An Optimized Protocol for Generation and Analysis of Ion Proton Sequencing Reads for RNA-Seq

BMC Genomics
BiotechnologyGenetics
2016English

Assessment of Viral RNA in Idiopathic Pulmonary Fibrosis Using RNA-seq

BMC Pulmonary Medicine
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2020English

Erratum: Analysis of Intronic and Exonic Reads in RNA-seq Data Characterizes Transcriptional and Post-Transcriptional Regulation

Nature Biotechnology
Applied MicrobiologyBiotechnologyBiomedical EngineeringMolecular MedicineBioengineering
2016English

A Transposable Approach to RNA-seq From Total RNA

Nature Methods
BiochemistryBiotechnologyCell BiologyMolecular Biology
2012English

RNA Velocity: Molecular Kinetics From Single-Cell RNA-Seq

Molecular Cell
Cell BiologyMolecular Biology
2018English

Stranded Whole Transcriptome RNA-Seq for All RNA Types

Current Protocols in Human Genetics
MedicineGenetics
2015English

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