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Publications by Trilce P. Estrada
Evaluation of Several Two-Step Scoring Functions Based on Linear Interaction Energy, Effective Ligand Size, and Empirical Pair Potentials for Prediction of Protein–Ligand Binding Geometry and Free Energy
Journal of Chemical Information and Modeling
Computer Science Applications
Chemistry
Chemical Engineering
Library
Information Sciences
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Absolute Binding Free Energy Calculations: On the Accuracy of Computational Scoring of Protein-Ligand Interactions
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Solvated Interaction Energy (SIE) for Scoring Protein-Ligand Binding Affinities. 1. Exploring the Parameter Space
Solvated Interaction Energy (SIE) for Scoring Protein–Ligand Binding Affinities. 2. Benchmark in the CSAR-2010 Scoring Exercise
Journal of Chemical Information and Modeling
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On Restraints in End-Point Protein-Ligand Binding Free Energy Calculations
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Calculation of Protein-Ligand Binding Free Energy by Using a Polarizable Potential
Proceedings of the National Academy of Sciences of the United States of America
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Charmm-Gui Ligand Binder for Relative Binding Free Energy Calculations
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Free Energy Landscapes for a Kainate Receptor Ligand-Binding Domain
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Protein-Ligand Interaction Energy-Based Entropy Calculations: Fundamental Challenges for Flexible Systems
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Surfaces
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CHARMM-GUI Ligand Binder for Absolute Binding Free Energy Calculations and Its Application
Journal of Chemical Information and Modeling
Computer Science Applications
Chemistry
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