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Publications by Tyler C. Shimko

Deep Learning Models Explore the Structural Effects of Transcription Factor-Dna Complexes on Binding Specificity

Biophysical Journal

English

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Heterogeneity of Transcription Factor Binding Specificity Models Within and Across Cell Lines

Genome Research

English

The Basis for Evolution of DNA-Binding Specificity of the Aft1 Transcription Factor in Yeasts

English

Decoding the Inversion Symmetry Underlying Transcription Factor DNA-Binding Specificity and Functionality in the Genome

Multidisciplinary

English

Structural and Dynamic Studies of the Transcription Factor ERG Reveal DNA Binding Is Allosterically Autoinhibited

Proceedings of the National Academy of Sciences of the United States of America

Multidisciplinary

English

Determinants of DNA-binding Specificity of ETS-domain Transcription Factors.

Molecular and Cellular Biology

Molecular Biology

English

DNA-Binding Motif of the Imprinted Transcription Factor PEG3

Multidisciplinary

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Effect of Osmolytes on the Binding of EGR1 Transcription Factor to DNA

Organic Chemistry

English

Role of Promoter DNA Sequence Variations on the Binding of EGR1 Transcription Factor

Archives of Biochemistry and Biophysics

Molecular Biology

English

Comprehensive Analysis of the DNA-Binding Specificity of an Aspergillus Nidulans Transcription Factor, AmyR, Using a Bead Display System

Bioscience, Biotechnology and Biochemistry

Organic Chemistry

Applied Microbiology

Molecular Biology

Analytical Chemistry

English