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Publications by Xiaojie Qiu

Cicero Predicts Cis -Regulatory DNA Interactions From Single-Cell Chromatin Accessibility Data

Molecular Cell
Cell BiologyMolecular Biology
2018English

Yet Another Hybrid Strategy for Auto-Tuning SpMV on GPUs

International Journal of Software Engineering and its Applications
Software
2015English

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Single Cell Chromatin Accessibility of the Developmental Cephalochordate

2020English

Integrative Single-Cell Analysis of Transcriptome, DNA Methylome and Chromatin Accessibility in Mouse Oocytes

Cell Research
Cell BiologyMolecular Biology
2018English

chromVAR: Inferring Transcription-Factor-Associated Accessibility From Single-Cell Epigenomic Data

Nature Methods
BiochemistryBiotechnologyCell BiologyMolecular Biology
2017English

Distinct Modes of DNA Accessibility in Plant Chromatin

Nature Communications
AstronomyGeneticsMolecular BiologyBiochemistryChemistryPhysics
2012English

Modeling DNA Sequence-Based Cis-Regulatory Gene Networks

Developmental Biology
Developmental BiologyCell BiologyMolecular Biology
2002English

Single Molecule Study of Cis-Platin DNA Interaction

Biophysical Journal
Biophysics
2011English

Single-Nucleus Chromatin Accessibility Reveals Intratumoral Epigenetic Heterogeneity in IDH1 Mutant Gliomas

Acta neuropathologica communications
Forensic MedicineMolecular NeurosciencePathologyNeurologyCellular
2019English

DNA Methylation and Chromatin Accessibility Profiling of Mouse and Human Fetal Germ Cells

Cell Research
Cell BiologyMolecular Biology
2016English

Single-Cell Pluripotency Regulatory Networks

Proteomics
BiochemistryMolecular Biology
2016English

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