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Publications by Yuan Jin

An Information Transmission Model for Transcription Factor Binding at Regulatory DNA Sites

Theoretical Biology and Medical Modelling

Health Informatics

English

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Single-Molecule Analysis of Transcription Factor Binding at Transcription Sites in Live Cells

Nature Communications

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Finding Sequence Motifs With Bayesian Models Incorporating Positional Information: An Application to Transcription Factor Binding Sites

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Computer Science Applications

Structural Biology

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English

Erroneous Attribution of Relevant Transcription Factor Binding Sites Despite Successful Prediction of Cis-Regulatory Modules

English

Statistical Tests for Natural Selection on Regulatory Regions Based on the Strength of Transcription Factor Binding Sites

BMC Evolutionary Biology

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Assessing the Model Transferability for Prediction of Transcription Factor Binding Sites Based on Chromatin Accessibility

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Human Monocyte-To-Macrophage Differentiation Involves Highly Localized Gain and Loss of DNA Methylation at Transcription Factor Binding Sites

Epigenetics and Chromatin

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Energy-Dependent Fitness: A Quantitative Model for the Evolution of Yeast Transcription Factor Binding Sites

Proceedings of the National Academy of Sciences of the United States of America

Multidisciplinary

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Quantitative Fine-Tuning of Photoreceptor Cis-Regulatory Elements Through Affinity Modulation of Transcription Factor Binding Sites

Molecular Medicine

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Identification of Transcription Factor Binding Sites Using ATAC-seq

English