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Publications in Applied Mathematics

In Silico Fragmentation for Computer Assisted Identification of Metabolite Mass Spectra

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2010English

Transposon Insertion Finder (TIF): A Novel Program for Detection of De Novo Transpositions of Transposable Elements

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2014English

Doepipeline: A Systematic Approach to Optimizing Multi-Level and Multi-Step Data Processing Workflows

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2019English

Rare Variants Analysis Using Penalization Methods for Whole Genome Sequence Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2015English

A Deep Adversarial Variational Autoencoder Model for Dimensionality Reduction in Single-Cell RNA Sequencing Analysis

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2020English

NucBreak: Location of Structural Errors in a Genome Assembly by Using Paired-End Illumina Reads

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2020English

PathME: Pathway Based Multi-Modal Sparse Autoencoders for Clustering of Patient-Level Multi-Omics Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2020English

Automatic Structure Classification of Small Proteins Using Random Forest

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2010English

Nonlinear Expression and Visualization of Nonmetric Relationships in Genetic Diseases and Microbiome Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2018English

Bluues: A Program for the Analysis of the Electrostatic Properties of Proteins Based on Generalized Born Radii

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2012English

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