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Publications in Applied Mathematics

SuiteMSA: Visual Tools for Multiple Sequence Alignment Comparison and Molecular Sequence Simulation

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2011English

A Site Specific Model and Analysis of the Neutral Somatic Mutation Rate in Whole-Genome Cancer Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2018English

Identifying Transcription Factor and microRNA Mediated Synergetic Regulatory Networks in Lung Cancer

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2013English

Comparative Interactions of Withanolides and Sterols With Two Members of Sterol Glycosyltransferases From Withania Somnifera

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2015English

Bayesian Semiparametric Regression Models to Characterize Molecular Evolution

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2012English

Context-Sensitive Use of Bioinformatics Tools With Complementary Functionalities for Generation of Relevant Hypothesis

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2014English

NextSV: A Meta-Caller for Structural Variants From Low-Coverage Long-Read Sequencing Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2018English

Seqping: Gene Prediction Pipeline for Plant Genomes Using Self-Training Gene Models and Transcriptomic Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2017English

Identification of Active miRNA and Transcription Factor Regulatory Pathways in Human Obesity-Related Inflammation

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2015English

MARZ: An Algorithm to Combinatorially Analyze Gapped N-Mer Models of Transcription Factor Binding

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2015English

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