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Publications in Applied Mathematics

Joint Between-Sample Normalization and Differential Expression Detection Through ℓ0-Regularized Regression

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2019English

Adaptive Coarse-Grained Monte Carlo Simulation of Reaction and Diffusion Dynamics in Heterogeneous Plasma Membranes

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2010English

Sensitivity and Correlation of Hypervariable Regions in 16S rRNA Genes in Phylogenetic Analysis

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2016English

University of Turku in the BioNLP'11 Shared Task

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2012English

Automated Parameter Estimation for Biological Models Using Bayesian Statistical Model Checking

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2015English

Agalma: An Automated Phylogenomics Workflow

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2013English

Systematic Evaluation of the Impact of ChIP-seq Read Designs on Genome Coverage, Peak Identification, and Allele-Specific Binding Detection

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2016English

Simulating Curvilinear Crack Propagation in Two Dimensions With Universal Meshes

International Journal for Numerical Methods in Engineering
Applied MathematicsNumerical AnalysisEngineering
2014English

MethPed: An R Package for the Identification of Pediatric Brain Tumor Subtypes

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2016English

Eliciting Candidate Anatomical Routes for Protein Interactions: A Scenario From Endocrine Physiology

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2013English

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