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Publications in Modeling

MetaPalette: Ak-Mer Painting Approach for Metagenomic Taxonomic Profiling and Quantification of Novel Strain Variation

mSystems
EvolutionEcologyGeneticsMolecular BiologyBiochemistrySystematicsMicrobiologySimulationComputer Science ApplicationsBehaviorModelingPhysiology
2016English

Phase-Field Lattice Boltzmann Model for Dendrites Growing and Moving in Melt Flow

npj Computational Materials
Mechanics of MaterialsMaterials ScienceSimulationComputer Science ApplicationsModeling
2019English

Adaptive Design of an X-Ray Magnetic Circular Dichroism Spectroscopy Experiment With Gaussian Process Modelling

npj Computational Materials
Mechanics of MaterialsMaterials ScienceSimulationComputer Science ApplicationsModeling
2018English

Multiobjective Genetic Training and Uncertainty Quantification of Reactive Force Fields

npj Computational Materials
Mechanics of MaterialsMaterials ScienceSimulationComputer Science ApplicationsModeling
2018English

Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil

mSystems
EvolutionEcologyGeneticsMolecular BiologyBiochemistrySystematicsMicrobiologySimulationComputer Science ApplicationsBehaviorModelingPhysiology
2020English

Oxidative Pathways of Deoxyribose and Deoxyribonate Catabolism

mSystems
EvolutionEcologyGeneticsMolecular BiologyBiochemistrySystematicsMicrobiologySimulationComputer Science ApplicationsBehaviorModelingPhysiology
2019English

Predictive Modelling of Ferroelectric Tunnel Junctions

npj Computational Materials
Mechanics of MaterialsMaterials ScienceSimulationComputer Science ApplicationsModeling
2016English

Atomistic Material Behavior at Extreme Pressures

npj Computational Materials
Mechanics of MaterialsMaterials ScienceSimulationComputer Science ApplicationsModeling
2016English

Reconstructing Phase Diagrams From Local Measurements via Gaussian Processes: Mapping the Temperature-Composition Space to Confidence

npj Computational Materials
Mechanics of MaterialsMaterials ScienceSimulationComputer Science ApplicationsModeling
2018English

SSUnique: Detecting Sequence Novelty in Microbiome Surveys

mSystems
EvolutionEcologyGeneticsMolecular BiologyBiochemistrySystematicsMicrobiologySimulationComputer Science ApplicationsBehaviorModelingPhysiology
2016English

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