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Publications in Systematics

lumpGEM: Systematic Generation of Subnetworks and Elementally Balanced Lumped Reactions for the Biosynthesis of Target Metabolites

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2017English

Activity in Inferior Parietal and Medial Prefrontal Cortex Signals the Accumulation of Evidence in a Probability Learning Task

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2013English

The Effect of Inhibition on Rate Code Efficiency Indicators

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2019English

The Trigger Factor Chaperone Encapsulates and Stabilizes Partial Folds of Substrate Proteins

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2015English

SourceSet: A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2019English

Interspecific Exchange of Avian Influenza Virus Genes in Alaska: The Influence of Trans-Hemispheric Migratory Tendency and Breeding Ground Sympatry

Molecular Ecology
GeneticsEvolutionEcologySystematicsBehavior
2010English

Fast and Accurate Learning When Making Discrete Numerical Estimates

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2016English

Risk-Sensitivity in Bayesian Sensorimotor Integration

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2012English

How to Estimate Kinship

Molecular Ecology
GeneticsEvolutionEcologySystematicsBehavior
2018English

A Model for Genetic and Epigenetic Regulatory Networks Identifies Rare Pathways for Transcription Factor Induced Pluripotency

PLoS Computational Biology
Molecular NeuroscienceEvolutionEcologyGeneticsBehaviorMolecular BiologySystematicsSimulationCellularComputational TheoryMathematicsModeling
2010English

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