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Figure S1: Optimal Discrepancy Range for the MIRU-profiler
doi 10.7717/peerj.5090/supp-4
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Table S1: Results for the MIRU-profiler Evaluation on the Draft Genomes Based on 150 Bp Reads
Figure 2: Evaluation of the MIRU-profiler on the Genome Assemblies Based on Illumina Miseq Reads.
Figure 1: A Schematic Representation of the MIRU-profiler Workflow in Comparison With the Experimental Protocol for the Standardized Genotyping of M. Tuberculosis Using 24 MIRU-VNTR Loci.
MIRU-profiler: A Rapid Tool for Determination of 24-Loci MIRU-VNTR Profiles From Assembled Genomes of Mycobacterium Tuberculosis
PeerJ
Genetics
Molecular Biology
Biochemistry
Biological Sciences
Medicine
Agricultural
Neuroscience
Table 1: Comparisons Among the MIRU-profiler, CASTB and Experimental Results.
Table S2: Details of Complete Genomes Used for Evaluation of the MIRU-profiler
Figure S1: Workflow
Figure S1: Climatic Variables for the Study Sites
Figure S1: The Rarefaction Curves for All Samples
