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Figure S4: Consensus Tree Based on PhyloBayes Analysis of the Concatenated Chloroplast Data Set, Using Amino Acid Data and the CAT-GTR Model With Gamma-Distributed Rates
doi 10.7717/peerj.6899/supp-4
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Figure S5: Consensus Tree Based on PhyloBayes Analysis of the Concatenated Chloroplast Data Set, Using Nucleotide Data and the CAT-GTR Model With Gamma-Distributed Rates
Figure S1: Consensus Tree Based on MrBayes Analysis of the Concatenated Chloroplast Data Set (Nucleotide), in Which Serine, Arginine and Isoleucine Codons Were Ambiguously Recoded Prior to Analysis
Figure 2: Phylogenetic Tree of Bartonella, as Based on Concatenated gltA and rpoB Genes Using a GTR Substitution Model.
Figure 2: Bayesian Consensus Trees Inferred From Analyses of Concatenated (A) Nucleotide and (B) Amino Acid Chloroplast Data (58 Protein-Coding Genes).
Data S4: Figure 7 Raw Data
Figure S4: Factor Analysis of the Environmental and Water Quality Data
Figure 3: Consensus Bayesian Phylogenetic Tree of the Badnavirus Using Amino Acid Sequences of the RNA-dependent DNA Polymerase Region Using Exabayes 1.4.1.
Table 6: Results of Species Delimitation Analysis Based on the Concatenated Tree.
Figure S2: The Strict Consensus Tree of Analysis 1
