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Publications by Daniel M. Ibrahim

Saturation Analysis of ChIP-seq Data for Reproducible Identification of Binding Peaks

Genome Research

English

Homeotic Arm-To-Leg Transformation Associated With Genomic Rearrangements at the PITX1 Locus

American Journal of Human Genetics

English

Related publications

Using MACS to Identify Peaks From ChIP-Seq Data

Current Protocols in Bioinformatics

Structural Biology

English

Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data

PLoS Computational Biology

Molecular Neuroscience

Molecular Biology

Computational Theory

English

Large-Scale Quality Analysis of Published ChIP-seq Data

G3: Genes, Genomes, Genetics

Molecular Biology

English

Iterative Fragmentation Improves the Detection of ChIP-seq Peaks for Inactive Histone Marks

Bioinformatics and Biology Insights

Computational Mathematics

Applied Mathematics

Computer Science Applications

Molecular Biology

English

T-Kde: A Method for Genome-Wide Identification of Constitutive Protein Binding Sites From Multiple ChIP-seq Data Sets

English

Identification of Factors Associated With Duplicate Rate in ChIP-seq Data

Multidisciplinary

English

Empirical Methods for Controlling False Positives and Estimating Confidence in ChIP-Seq Peaks

BMC Bioinformatics

Applied Mathematics

Computer Science Applications

Structural Biology

Molecular Biology

English

Assessing Computational Methods for Transcription Factor Target Gene Identification Based on ChIP-seq Data

PLoS Computational Biology

Molecular Neuroscience

Molecular Biology

Computational Theory

English

Author Correction: Identification of Novel Dysregulated Key Genes in Breast Cancer Through High Throughput ChIP-Seq Data Analysis

Scientific Reports

Multidisciplinary

English