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Publications by Zaid Al-Ars

GASAL2: A GPU Accelerated Sequence Alignment Library for High-Throughput NGS Data

BMC Bioinformatics
BiochemistryApplied MathematicsComputer Science ApplicationsStructural BiologyMolecular Biology
2019English

SparkGA2: Production-Quality Memory-Efficient Apache Spark Based Genome Analysis Framework

PLoS ONE
Multidisciplinary
2019English

Analysis of RNAseq Datasets From a Comparative Infectious Disease Zebrafish Model Using GeneTiles Bioinformatics

Immunogenetics
ImmunologyGenetics
2014English

DOPA: GPU-based Protein Alignment Using Database and Memory Access Optimizations

BMC Research Notes
BiochemistryMedicineGeneticsMolecular Biology
2011English

Exploring Complex Brain-Simulation Workloads on Multi-Gpu Deployments

Transactions on Architecture and Code Optimization
HardwareInformation SystemsArchitectureSoftware
2020English

CHOP: Haplotype-Aware Path Indexing in Population Graphs

Genome Biology
2020English

An Accelerator for Posit Arithmetic Targeting Posit Level 1 BLAS Routines and Pair-HMM

2019English

PPM Reduction on Embedded Memories in System on Chip

12th IEEE European Test Symposium (ETS'07)
2007English

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